Acknowledgements
Funding
EOSC-Life
workflowhub.eu lead development is part of EOSC-Life (WP2 Tools Collaboratory), funded by European Union’s Horizon 2020 programme under grant agreement H2020-INFRAEOSC-2018-2 824087.
Other funding
We are also grateful for contributions funded by:
- BioExcel-2 (H2020-INFRAEDI-2018-1 823830)
- IBISBA (H2020-INFRAIA-2017-1-two-stage 730976, H2020-INFRADEV-2019-2 871118)
- SYNTHESYS+ (H2020-INFRAIA-2018-1 823827)
- ..in addition to contributions from WorkflowHub Club participants
Source code
The main WorkflowHub codebase is based on SEEK and builds on previous experience with developing myExperiment. SEEK is implemented in Ruby on Rails using a wide range of open source Ruby gems.
Related projects
ELIXIR
WorkflowHub activities are strongly coordinated with ELIXIR Europe and ELIXIR Tools Platform with participants from:
- ELIXIR UK
- ELIXIR Belgium
- ELIXIR Spain
- ELIXIR France
- ELIXIR Germany
- ELIXIR Italy
- ELIXIR Netherlands
- ELIXIR Hub
Collaborations
The WorkflowHub community collaborates closely with (at least) these projects:
- EOSC-Life
- Research Object Crate (RO-Crate)
- BioSchemas
- Common Workflow Language
- Galaxy Europe
- BioExcel
- FAIRDOM
- FAIRDOM-SEEK
- Australian BioCommons
WorkflowHub Club
The weekly WorkflowHub Club is chaired by Frederik Coppens.
Participants include:
- Alan R Williams (The University of Manchester, EU-IBISBA, Bioschemas)
- Alexander Vasilenko (VKM IBPM RAS, MIRRI)
- Alexander Kanitz (University of Basel, Galaxy Project)
- Alban Gaignard (ELIXIR-FR)
- Ambarish Kumar (Jawaharlal Nehru University, New Delhi, India)
- Antonio Rosato (INSTRUCT)
- Bert Droesbeke (VIB-UGent Center for Plant Systems Biology, ELIXIR-BE)
- Björn Grüning (University of Freiburg, ELIXIR-DE, Galaxy Project)
- Carole Goble (The University of Manchester, ELIXIR-UK, EOSC-Life, EU-IBISBA, Bioschemas)
- Carlos Oscar Sorzano (CNB CSIC, SCIPION, EOSC-Life)
- Castrense Savojardo (ELIXIR-IT)
- Dan Fornika
- Decruw Cedric
- Djura Smits (Netherlands eScience Center)
- Emidio Capriotti (UNIBO, Italy)
- Emmy Tsang
- Finn Bacall (The University of Manchester, ELIXIR-UK, EOSC-Life)
- Flora D’Anna (VIB-UGent Center for Plant Systems Biology, ELIXIR-BE)
- Frédéric Lemoine (Institut Pasteur, Paris)
- Frederik Coppens (VIB-UGent Center for Plant Systems Biology, ELIXIR-BE, EOSC-Life)
- Georg Peiter
- Giacomo Tartari (ELIXIR-IT)
- Hervé Ménager (Institut Pasteur, ELIXIR-FR, bio.tools)
- Ignacio Eguinoa (VIB-UGent Center for Plant Systems Biology, ELIXIR-BE)
- Jennifer Harrow (ELIXIR-Hub, tools platform coordinator)
- Johan Gustafsson (Australian BioCommons)
- Jon Ison (Institut Pasteur, ELIXIR-FR, bio.tools)
- José Mª Fernández (BSC, ELIXIR-ES, EOSC-Life)
- Kiran K Telukunta
- Lars Ridder (Netherlands eScience Center)
- Laura del Caño (CNB-CSIC, SCIPION, INSTRUCT, EOSC-Life)
- Laura Rodriguez-Navas (BSC, ELIXIR-ES, EOSC-Life)
- Leyla Garcia (ELIXIR-DE, Bioschemas)
- Luca Pireddu (CRS4/BBMRI)
- Magnus Palmblad (LUMC, ELIXIR-NL)
- Marco Tangaro (ELIXIR-IT)
- Michael R. Crusoe (ELIXIR-NL, CWL, standards developer, interop cheerleader)
- Miguel Vazquez (BSC, ELIXIR-ES)
- Miriam Payá Milans (CBGP, Madrid)
- Munazah Andrabi (The University of Manchester, ELIXIR-UK)
- Nick Juty (The University of Manchester, ELIXIR-UK)
- Paolo Romano (MIRRI)
- Pier Luigi Martelli (ELIXIR-IT)
- Philipp G.
- Rena Bakhshi (Netherlands eScience Center)
- Rob Hooft (ELIXIR-NL)
- Robin Richardson (Netherlands eScience Center)
- Romain Dallet (EMBRC)
- Salvador Capella-Gutierrez (BSC, ELIXIR-ES)
- Simone Leo (CRS4/BBMRI, EOSC-Life)
- Sirarat Sarntivijai (ELIXIR-Hub)
- Stian Soiland-Reyes (The University of Manchester, ELIXIR-UK, BioExcel, CWL)
- Stuart Owen (The University of Manchester, FAIRDOM, ELIXIR-UK)
- Vahid Kiani (VIB-UGent Center for Plant Systems Biology, ELIXIR-BE)
- Vincenzo Laveglia (CIRMMP Florence, EOSC-Life)
- Wolfgang Müller (HITS GmbH, ELIXIR-DE)
- Xiaoming Hu (HITS GmbH, ELIXIR-DE)
- Philip Ewels (SciLifeLab, nf-core, nextflow)
We are also grateful for contributions through hackathons/codefests and other events from:
- Andrea Giachetti (CIRMMP Florence EOSC-life demonstrator)
- Anne Fouilloux
- Assunta DeSanto
- Boï Kone
- Charles Hadley King (George Washington University)
- Chris Child (The University of Manchester, TeSS)
- Daniel Garijo
- Eoghan Ó Carragáin
- Festus Nyasimi
- Ivan Topolsky
- Janisha Patel (George Washington University)
- Jasper Koehorst (EU-IBISBA, UNLOCK)
- Jennifer Chang
- Maciek Bak
- Marius van den Beek (PennState University, Galaxy project)
- Melanie Föll
- Nicola Soranzo
- Oscar Corcho (UPM)
- Peter Sefton
- Raul Palma (Poznan Supercomputing Centre, RELIANCE)
- Sheeba Samuel
- Shivani Sharma
- Victoria Dominguez Del Angel
- Yannis Doukas (The University of Manchester)